Index of /quickload/S_lycopersicum_Jun

strapdown: '/styling/strapdown/v/0.2/strapdown.js'};

<html>
<body>
<title>IGB QuickLoad site for the tomato Solanum lycopersicum</title>
<h1>Solanum lycopersicum, SL5.0</h1>
<p>
The data files listed below are for visualization in the Integrated Genome
Browser, available from <a href="https://bioviz.org">BioViz.org</a>.
</p>
<p>
Sequence (.2bit) and gene models (.bed.gz) data files were re-formatted from files downloaded in July, 2022 from the <a href="https://solgenomics.net/">SolGenomics Web site</a>. The sequence data were from the SL5.0 release of the tomato genome.
</p>
<p> 
Files with extension .gz were compressed and indexed using bgzip and
tabix tools from Heng Li. 
</p>
<p>
The .2bit file was converted from fasta to .2bit format using the faToTwoBit converter from Jim Kent. The genome.txt file was created using twoBitInfo, also from Jim Kent. Executables for these and other tools from Jim Kent are available from <a href="http://hgdownload.cse.ucsc.edu/admin/exe/">http://hgdownload.cse.ucsc.edu/admin/exe/</a>.
</p>
</body>
</html>

Name	Last modified	Size	Description
Parent Directory		-
S_lycopersicum_Jun_2022.2bit	06-Jul-2022 12:31	191M	Sequence data in blat 2bit format
S_lycopersicum_Jun_2022.bed.gz	01-Mar-2023 15:32	2.3M	Annotation or junction file
S_lycopersicum_Jun_2022.bed.gz.tbi	01-Mar-2023 15:32	96K	Tabix index file
annots.xml	06-Jul-2022 12:31	368	Annotation and data file list
genome.txt	06-Jul-2022 12:31	145	Chromosome lengths and assembly information

Apache/2.2.34 (Amazon) Server at quickload.bioviz.org Port 80